Details
| Title | Analysis of polymorphism in quasi-monomorphic microsatellite loci for microsatellite instability testing: выпускная квалификационная работа магистра: направление 12.04.04 «Биотехнические системы и технологии» ; образовательная программа 12.04.04_01 «Молекулярные и клеточные биомедицинские технологии (международная образовательная программа) / Molecular and Cellular Biomedical Technologies (International Educational Program)» |
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| Creators | Огогхо Огенекаро Океогене |
| Scientific adviser | Большакова Анастасия Викторовна |
| Organization | Санкт-Петербургский политехнический университет Петра Великого. Институт биомедицинских систем и биотехнологий |
| Imprint | Санкт-Петербург, 2026 |
| Collection | Выпускные квалификационные работы ; Общая коллекция |
| Subjects | microsatellite instability ; mismatch repair deficiency ; lynch syndrome ; colorectal cancer ; endometrial cancer ; polymerase chain reaction |
| Document type | Master graduation qualification work |
| Language | Russian |
| Level of education | Master |
| Speciality code (FGOS) | 12.04.04 |
| Speciality group (FGOS) | 120000 - Фотоника, приборостроение, оптические и биотехнические системы и технологии |
| DOI | 10.18720/SPBPU/3/2026/vr/vr26-5765 |
| Rights | Доступ по паролю из сети Интернет (чтение) |
| Additionally | New arrival |
| Record key | ru\spstu\vkr\45218 |
| Record create date | 9/7/2026 |
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The given work is devoted to determining the allele length spectrum of 15 microsatellite markers in seven ethnic groups (Slavs, Avars, Chechens, Tatars, Ossetians, Ingush, and Yakuts) in order to verify the quasimonomorphic length range of markers used in an advanced test being developed for assessing microsatellite instability (MSI) in malignant tumors. The test under development includes a panel of five standard and ten additional microsatellite markers. The standard recommended test comprises five markers (NR-27, NR-21, NR-24, BAT-25, BAT-26) and involves testing both tumor and healthy patient DNA samples. However, in practice, a healthy tissue DNA sample is not always available. This approach carries a risk of false‑positive interpretation of results due to rare polymorphisms. To eliminate this limitation, ten highly monomorphic markers have been additionally included in the panel: TBC-22, LNX-15, SMC-17, MTM-16, PTP-16, FAM-17, CAT-25, HT-17, MAP-17, and ABC-16. As a result, the allele length spectrum was obtained. The quasimonomorphic length range of these markers was confirmed. No sample showed polymorphisms simultaneously in three or more markers out of 15. Thus, the risk of a false‑positive result when assessing MSI using the advanced test under development, without comparison of tumor and normal DNA, is virtually eliminated.
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